Types

Documentation

data NodeLabel

Constructors

NodeLabel

Fields

• nodeID :: !Text
• nodeLabels :: !Labels

Instances

Eq NodeLabel

Defined in Types

Methods

(==) :: NodeLabel -> NodeLabel -> Bool

(/=) :: NodeLabel -> NodeLabel -> Bool

Ord NodeLabel

Defined in Types

Methods

compare :: NodeLabel -> NodeLabel -> Ordering

(<) :: NodeLabel -> NodeLabel -> Bool

(<=) :: NodeLabel -> NodeLabel -> Bool

(>) :: NodeLabel -> NodeLabel -> Bool

(>=) :: NodeLabel -> NodeLabel -> Bool

max :: NodeLabel -> NodeLabel -> NodeLabel

min :: NodeLabel -> NodeLabel -> NodeLabel

Read NodeLabel

Defined in Types

Methods

readsPrec :: Int -> ReadS NodeLabel

readList :: ReadS [NodeLabel]

readPrec :: ReadPrec NodeLabel

readListPrec :: ReadPrec [NodeLabel]

Show NodeLabel

Defined in Types

Methods

showsPrec :: Int -> NodeLabel -> ShowS

show :: NodeLabel -> String

showList :: [NodeLabel] -> ShowS

Generic NodeLabel

Defined in Types

Associated Types

type Rep NodeLabel :: Type -> Type

Methods

from :: NodeLabel -> Rep NodeLabel x

to :: Rep NodeLabel x -> NodeLabel

FromJSON NodeLabel

Defined in Types

Methods

parseJSON :: Value -> Parser NodeLabel

parseJSONList :: Value -> Parser [NodeLabel]

WorkableTree (Tree NodeLabel)

Defined in Types

Methods

makeWorkable :: Tree NodeLabel -> Tree NodeLabel

type Rep NodeLabel

Defined in Types

type Rep NodeLabel = D1 (MetaData "NodeLabel" "Types" "find-clumpiness-0.2.3.2-2gkO9401iPO824eplVKyTH" False) (C1 (MetaCons "NodeLabel" PrefixI True) (S1 (MetaSel (Just "nodeID") NoSourceUnpackedness SourceStrict DecidedStrict) (Rec0 Text) :*: S1 (MetaSel (Just "nodeLabels") NoSourceUnpackedness SourceStrict DecidedStrict) (Rec0 Labels)))

data Format

Constructors

JSON

RJSON

Haskell HaskellFormat

Newick

Lineage Text

Instances

Read Format

Defined in Types

Methods

readsPrec :: Int -> ReadS Format

readList :: ReadS [Format]

readPrec :: ReadPrec Format

readListPrec :: ReadPrec [Format]

data HaskellFormat

Constructors

BaseFormat

TreeFormat

DendrogramFormat

Instances

Read HaskellFormat

Defined in Types

Methods

readsPrec :: Int -> ReadS HaskellFormat

readList :: ReadS [HaskellFormat]

readPrec :: ReadPrec HaskellFormat

readListPrec :: ReadPrec [HaskellFormat]

data Exclusivity

Constructors

Exclusive

AllExclusive

Majority

Instances

Read Exclusivity

Defined in Types

Methods

readsPrec :: Int -> ReadS Exclusivity

readList :: ReadS [Exclusivity]

readPrec :: ReadPrec Exclusivity

readListPrec :: ReadPrec [Exclusivity]

newtype Separator

Constructors

Separator Text

Instances

Show Separator

Defined in Types

Methods

showsPrec :: Int -> Separator -> ShowS

show :: Separator -> String

showList :: [Separator] -> ShowS

newtype Field

Constructors

Field Int

Instances

Show Field

Defined in Types

Methods

showsPrec :: Int -> Field -> ShowS

show :: Field -> String

showList :: [Field] -> ShowS

type Label = Text

type Labels = Seq Label

class WorkableTree a where

Class of trees that can be converted to workable trees.

Methods

makeWorkable :: a -> Tree NodeLabel

Instances

WorkableTree (Tree (Seq Text))

Defined in Types

Methods

makeWorkable :: Tree (Seq Text) -> Tree NodeLabel

WorkableTree (Tree NodeLabel)

Defined in Types

Methods

makeWorkable :: Tree NodeLabel -> Tree NodeLabel

WorkableTree (Dendrogram (Seq Text))

Defined in Types

Methods

makeWorkable :: Dendrogram (Seq Text) -> Tree NodeLabel