Network.Google.Resource.Genomics.ReadGroupSets.Import

Creates read group sets by asynchronously importing the provided information. The caller must have WRITE permissions to the dataset. ## Notes on BAM import - Tags will be converted to strings - tag types are not preserved - Comments (`'CO`) in the input file header will not be preserved - Original header order of references (`'SQ`) will not be preserved - Any reverse stranded unmapped reads will be reverse complemented, and their qualities (and "BQ" tag, if any) will be reversed - Unmapped reads will be stripped of positional information (reference name and position)

See: API Reference for genomics.readgroupsets.import.

REST Resource

type ReadGroupSetsImportResource = "v1" :> ("readgroupsets:import" :> (QueryParam "$.xgafv" Text :> (QueryParam "upload_protocol" Text :> (QueryParam "pp" Bool :> (QueryParam "access_token" Text :> (QueryParam "uploadType" Text :> (QueryParam "bearer_token" Text :> (QueryParam "callback" Text :> (QueryParam "alt" AltJSON :> (ReqBody `[JSON]` ImportReadGroupSetsRequest :> Post `[JSON]` Operation))))))))))

A resource alias for genomics.readgroupsets.import method which the ReadGroupSetsImport request conforms to.

Creating a Request

readGroupSetsImport

Arguments

:: ImportReadGroupSetsRequest

rgsiPayload

-> ReadGroupSetsImport

Creates a value of ReadGroupSetsImport with the minimum fields required to make a request.

Use one of the following lenses to modify other fields as desired:

• rgsiXgafv
• rgsiUploadProtocol
• rgsiPp
• rgsiAccessToken
• rgsiUploadType
• rgsiPayload
• rgsiBearerToken
• rgsiCallback

data ReadGroupSetsImport

Creates read group sets by asynchronously importing the provided information. The caller must have WRITE permissions to the dataset. ## Notes on BAM import - Tags will be converted to strings - tag types are not preserved - Comments (`'CO`) in the input file header will not be preserved - Original header order of references (`'SQ`) will not be preserved - Any reverse stranded unmapped reads will be reverse complemented, and their qualities (and "BQ" tag, if any) will be reversed - Unmapped reads will be stripped of positional information (reference name and position)

See: readGroupSetsImport smart constructor.

Instances

Eq ReadGroupSetsImport

Data ReadGroupSetsImport

Show ReadGroupSetsImport

Generic ReadGroupSetsImport

GoogleRequest ReadGroupSetsImport

type Rep ReadGroupSetsImport

type Rs ReadGroupSetsImport = Operation

Request Lenses

rgsiXgafv :: Lens' ReadGroupSetsImport (Maybe Text)

V1 error format.

rgsiUploadProtocol :: Lens' ReadGroupSetsImport (Maybe Text)

Upload protocol for media (e.g. "raw", "multipart").

rgsiPp :: Lens' ReadGroupSetsImport Bool

Pretty-print response.

rgsiAccessToken :: Lens' ReadGroupSetsImport (Maybe Text)

OAuth access token.

rgsiUploadType :: Lens' ReadGroupSetsImport (Maybe Text)

Legacy upload protocol for media (e.g. "media", "multipart").

rgsiPayload :: Lens' ReadGroupSetsImport ImportReadGroupSetsRequest

Multipart request metadata.

rgsiBearerToken :: Lens' ReadGroupSetsImport (Maybe Text)

OAuth bearer token.

rgsiCallback :: Lens' ReadGroupSetsImport (Maybe Text)

JSONP