Network.Google.Resource.Genomics.ReadGroupSets.Export

Exports a read group set to a BAM file in Google Cloud Storage. For the definitions of read group sets and other genomics resources, see Fundamentals of Google Genomics Note that currently there may be some differences between exported BAM files and the original BAM file at the time of import. See ImportReadGroupSets for caveats.

See: Genomics API Reference for genomics.readgroupsets.export.

REST Resource

type ReadGroupSetsExportResource = "v1" :> ("readgroupsets" :> (CaptureMode "readGroupSetId" "export" Text :> (QueryParam "$.xgafv" Xgafv :> (QueryParam "upload_protocol" Text :> (QueryParam "pp" Bool :> (QueryParam "access_token" Text :> (QueryParam "uploadType" Text :> (QueryParam "bearer_token" Text :> (QueryParam "callback" Text :> (QueryParam "alt" AltJSON :> (ReqBody '[JSON] ExportReadGroupSetRequest :> Post '[JSON] Operation)))))))))))

A resource alias for genomics.readgroupsets.export method which the ReadGroupSetsExport request conforms to.

Creating a Request

readGroupSetsExport

Arguments

:: Text

rgseReadGroupSetId

-> ExportReadGroupSetRequest

rgsePayload

-> ReadGroupSetsExport

Creates a value of ReadGroupSetsExport with the minimum fields required to make a request.

Use one of the following lenses to modify other fields as desired:

• rgseXgafv
• rgseReadGroupSetId
• rgseUploadProtocol
• rgsePp
• rgseAccessToken
• rgseUploadType
• rgsePayload
• rgseBearerToken
• rgseCallback

data ReadGroupSetsExport

Exports a read group set to a BAM file in Google Cloud Storage. For the definitions of read group sets and other genomics resources, see Fundamentals of Google Genomics Note that currently there may be some differences between exported BAM files and the original BAM file at the time of import. See ImportReadGroupSets for caveats.

See: readGroupSetsExport smart constructor.

Instances

Eq ReadGroupSetsExport

Methods

(==) :: ReadGroupSetsExport -> ReadGroupSetsExport -> Bool

(/=) :: ReadGroupSetsExport -> ReadGroupSetsExport -> Bool

Data ReadGroupSetsExport

Methods

gfoldl :: (forall d b. Data d => c (d -> b) -> d -> c b) -> (forall g. g -> c g) -> ReadGroupSetsExport -> c ReadGroupSetsExport

gunfold :: (forall b r. Data b => c (b -> r) -> c r) -> (forall r. r -> c r) -> Constr -> c ReadGroupSetsExport

toConstr :: ReadGroupSetsExport -> Constr

dataTypeOf :: ReadGroupSetsExport -> DataType

dataCast1 :: Typeable (* -> *) t => (forall d. Data d => c (t d)) -> Maybe (c ReadGroupSetsExport)

dataCast2 :: Typeable (* -> * -> *) t => (forall d e. (Data d, Data e) => c (t d e)) -> Maybe (c ReadGroupSetsExport)

gmapT :: (forall b. Data b => b -> b) -> ReadGroupSetsExport -> ReadGroupSetsExport

gmapQl :: (r -> r' -> r) -> r -> (forall d. Data d => d -> r') -> ReadGroupSetsExport -> r

gmapQr :: (r' -> r -> r) -> r -> (forall d. Data d => d -> r') -> ReadGroupSetsExport -> r

gmapQ :: (forall d. Data d => d -> u) -> ReadGroupSetsExport -> [u]

gmapQi :: Int -> (forall d. Data d => d -> u) -> ReadGroupSetsExport -> u

gmapM :: Monad m => (forall d. Data d => d -> m d) -> ReadGroupSetsExport -> m ReadGroupSetsExport

gmapMp :: MonadPlus m => (forall d. Data d => d -> m d) -> ReadGroupSetsExport -> m ReadGroupSetsExport

gmapMo :: MonadPlus m => (forall d. Data d => d -> m d) -> ReadGroupSetsExport -> m ReadGroupSetsExport

Show ReadGroupSetsExport

Methods

showsPrec :: Int -> ReadGroupSetsExport -> ShowS

show :: ReadGroupSetsExport -> String

showList :: [ReadGroupSetsExport] -> ShowS

Generic ReadGroupSetsExport

Associated Types

type Rep ReadGroupSetsExport :: * -> *

Methods

from :: ReadGroupSetsExport -> Rep ReadGroupSetsExport x

to :: Rep ReadGroupSetsExport x -> ReadGroupSetsExport

GoogleRequest ReadGroupSetsExport

Associated Types

type Rs ReadGroupSetsExport :: *

type Scopes ReadGroupSetsExport :: [Symbol]

Methods

requestClient :: ReadGroupSetsExport -> Client (Rs ReadGroupSetsExport)

type Rep ReadGroupSetsExport

type Rep ReadGroupSetsExport = D1 (MetaData "ReadGroupSetsExport" "Network.Google.Resource.Genomics.ReadGroupSets.Export" "gogol-genomics-0.3.0-GPX9YasYuQx91P3G1HVwWC" False) (C1 (MetaCons "ReadGroupSetsExport'" PrefixI True) ((:*:) ((:*:) ((:*:) (S1 (MetaSel (Just Symbol "_rgseXgafv") NoSourceUnpackedness SourceStrict DecidedStrict) (Rec0 (Maybe Xgafv))) (S1 (MetaSel (Just Symbol "_rgseReadGroupSetId") NoSourceUnpackedness SourceStrict DecidedStrict) (Rec0 Text))) ((:*:) (S1 (MetaSel (Just Symbol "_rgseUploadProtocol") NoSourceUnpackedness SourceStrict DecidedStrict) (Rec0 (Maybe Text))) (S1 (MetaSel (Just Symbol "_rgsePp") NoSourceUnpackedness SourceStrict DecidedStrict) (Rec0 Bool)))) ((:*:) ((:*:) (S1 (MetaSel (Just Symbol "_rgseAccessToken") NoSourceUnpackedness SourceStrict DecidedStrict) (Rec0 (Maybe Text))) (S1 (MetaSel (Just Symbol "_rgseUploadType") NoSourceUnpackedness SourceStrict DecidedStrict) (Rec0 (Maybe Text)))) ((:*:) (S1 (MetaSel (Just Symbol "_rgsePayload") NoSourceUnpackedness SourceStrict DecidedStrict) (Rec0 ExportReadGroupSetRequest)) ((:*:) (S1 (MetaSel (Just Symbol "_rgseBearerToken") NoSourceUnpackedness SourceStrict DecidedStrict) (Rec0 (Maybe Text))) (S1 (MetaSel (Just Symbol "_rgseCallback") NoSourceUnpackedness SourceStrict DecidedStrict) (Rec0 (Maybe Text))))))))

type Scopes ReadGroupSetsExport

type Scopes ReadGroupSetsExport = (:) Symbol "https://www.googleapis.com/auth/cloud-platform" ((:) Symbol "https://www.googleapis.com/auth/devstorage.read_write" ((:) Symbol "https://www.googleapis.com/auth/genomics" ([] Symbol)))

type Rs ReadGroupSetsExport

type Rs ReadGroupSetsExport = Operation

Request Lenses

rgseXgafv :: Lens' ReadGroupSetsExport (Maybe Xgafv)

V1 error format.

rgseReadGroupSetId :: Lens' ReadGroupSetsExport Text

Required. The ID of the read group set to export. The caller must have READ access to this read group set.

rgseUploadProtocol :: Lens' ReadGroupSetsExport (Maybe Text)

Upload protocol for media (e.g. "raw", "multipart").

rgsePp :: Lens' ReadGroupSetsExport Bool

Pretty-print response.

rgseAccessToken :: Lens' ReadGroupSetsExport (Maybe Text)

OAuth access token.

rgseUploadType :: Lens' ReadGroupSetsExport (Maybe Text)

Legacy upload protocol for media (e.g. "media", "multipart").

rgsePayload :: Lens' ReadGroupSetsExport ExportReadGroupSetRequest

Multipart request metadata.

rgseBearerToken :: Lens' ReadGroupSetsExport (Maybe Text)

OAuth bearer token.

rgseCallback :: Lens' ReadGroupSetsExport (Maybe Text)

JSONP