Data.BAM.Version1_6.BAM

Description

This library enables the decoding/encoding of SAM, BAM and CRAM file formats.

BAM_V1_6_BAM version 1.6 data type

data BAM_V1_6_BAM

Custom BAM_V1_6_BAM (BAM version 1.6) data type.

See the SAM v1.6 specification documentation.

Constructors

BAM_V1_6_BAM

Fields

• bam_v1_6_bam_bamheader :: Maybe BAM_V1_6_BAM_BAMHeader
• bam_v1_6_bam_bamalignments :: Maybe BAM_V1_6_BAM_BAMAlignments
• bam_v1_6_bam_endoffilemarker :: Bool

Instances

Generic BAM_V1_6_BAM

Defined in Data.BAM.Version1_6.BAM

Associated Types

type Rep BAM_V1_6_BAM :: Type -> Type

Methods

from :: BAM_V1_6_BAM -> Rep BAM_V1_6_BAM x

to :: Rep BAM_V1_6_BAM x -> BAM_V1_6_BAM

Show BAM_V1_6_BAM

Defined in Data.BAM.Version1_6.BAM

Methods

showsPrec :: Int -> BAM_V1_6_BAM -> ShowS

show :: BAM_V1_6_BAM -> String

showList :: [BAM_V1_6_BAM] -> ShowS

Eq BAM_V1_6_BAM

Defined in Data.BAM.Version1_6.BAM

Methods

(==) :: BAM_V1_6_BAM -> BAM_V1_6_BAM -> Bool

(/=) :: BAM_V1_6_BAM -> BAM_V1_6_BAM -> Bool

type Rep BAM_V1_6_BAM

Defined in Data.BAM.Version1_6.BAM

type Rep BAM_V1_6_BAM = D1 ('MetaData "BAM_V1_6_BAM" "Data.BAM.Version1_6.BAM" "hs-samtools-0.10.0.1-inplace" 'False) (C1 ('MetaCons "BAM_V1_6_BAM" 'PrefixI 'True) (S1 ('MetaSel ('Just "bam_v1_6_bam_bamheader") 'NoSourceUnpackedness 'NoSourceStrictness 'DecidedStrict) (Rec0 (Maybe BAM_V1_6_BAM_BAMHeader)) :*: (S1 ('MetaSel ('Just "bam_v1_6_bam_bamalignments") 'NoSourceUnpackedness 'NoSourceStrictness 'DecidedStrict) (Rec0 (Maybe BAM_V1_6_BAM_BAMAlignments)) :*: S1 ('MetaSel ('Just "bam_v1_6_bam_endoffilemarker") 'NoSourceUnpackedness 'NoSourceStrictness 'DecidedStrict) (Rec0 Bool))))