Copyright	(c) Matthew Mosior 2023
License	BSD-style
Maintainer	mattm.github@gmail.com
Portability	portable
Safe Haskell	Safe-Inferred
Language	Haskell2010

Data.BAM.Version1_6.BAM.ReferenceInformation.Base

Contents

BAM_V1_6_BAM_Reference_Information version 1.6 data type

Description

This library enables the decoding/encoding of SAM, BAM and CRAM file formats.

Synopsis

data BAM_V1_6_BAM_Reference_Information = BAM_V1_6_BAM_Reference_Information {
}

BAM_V1_6_BAM_Reference_Information version 1.6 data type

data BAM_V1_6_BAM_Reference_Information Source #

Custom BAM_V1_6_BAM_Reference_Information (BAM version 1.6) data type.

See the SAM v1.6 specification documentation.

Constructors

BAM_V1_6_BAM_Reference_Information
Fields bam_v1_6_bam_reference_information_l_name :: Word32 Length of the reference name plus 1 (including NUL). bam_v1_6_bam_reference_information_name :: ByteString Reference sequence name; NUL terminated. bam_v1_6_bam_reference_information_l_ref :: Word32 Length of the reference sequence.

Instances

Instances details

Generic BAM_V1_6_BAM_Reference_Information Source #
Instance details Defined in Data.BAM.Version1_6.BAM.ReferenceInformation.Base Associated Types type Rep BAM_V1_6_BAM_Reference_Information :: Type -> Type # Methods from :: BAM_V1_6_BAM_Reference_Information -> Rep BAM_V1_6_BAM_Reference_Information x # to :: Rep BAM_V1_6_BAM_Reference_Information x -> BAM_V1_6_BAM_Reference_Information #
Show BAM_V1_6_BAM_Reference_Information Source #
Instance details Defined in Data.BAM.Version1_6.BAM.ReferenceInformation.Base Methods showsPrec :: Int -> BAM_V1_6_BAM_Reference_Information -> ShowS # show :: BAM_V1_6_BAM_Reference_Information -> String # showList :: [BAM_V1_6_BAM_Reference_Information] -> ShowS #
Eq BAM_V1_6_BAM_Reference_Information Source #
Instance details Defined in Data.BAM.Version1_6.BAM.ReferenceInformation.Base Methods (==) :: BAM_V1_6_BAM_Reference_Information -> BAM_V1_6_BAM_Reference_Information -> Bool # (/=) :: BAM_V1_6_BAM_Reference_Information -> BAM_V1_6_BAM_Reference_Information -> Bool #
type Rep BAM_V1_6_BAM_Reference_Information Source #
Instance details Defined in Data.BAM.Version1_6.BAM.ReferenceInformation.Base type Rep BAM_V1_6_BAM_Reference_Information = D1 ('MetaData "BAM_V1_6_BAM_Reference_Information" "Data.BAM.Version1_6.BAM.ReferenceInformation.Base" "hs-samtools-0.10.0.3-inplace" 'False) (C1 ('MetaCons "BAM_V1_6_BAM_Reference_Information" 'PrefixI 'True) (S1 ('MetaSel ('Just "bam_v1_6_bam_reference_information_l_name") 'NoSourceUnpackedness 'NoSourceStrictness 'DecidedStrict) (Rec0 Word32) :: (S1 ('MetaSel ('Just "bam_v1_6_bam_reference_information_name") 'NoSourceUnpackedness 'NoSourceStrictness 'DecidedStrict) (Rec0 ByteString) :: S1 ('MetaSel ('Just "bam_v1_6_bam_reference_information_l_ref") 'NoSourceUnpackedness 'NoSourceStrictness 'DecidedStrict) (Rec0 Word32))))