Data.BAM.Version1_6.Base

Description

This library enables the decoding/encoding of SAM, BAM and CRAM file formats.

BAM_V1_6 version 1.6 data type

newtype BAM_V1_6

Custom BAM_V1_6 (BAM version 1.6) newtype.

See the SAM v1.6 specification documentation.

Constructors

BAM_V1_6

Fields

• bam_v1_6 :: Seq BAM_V1_6_BGZFBlock

  Sequence holding all BGZF blocks of data within the BAM file.

Instances

Generic BAM_V1_6

Defined in Data.BAM.Version1_6.Base

Associated Types

type Rep BAM_V1_6 :: Type -> Type

Methods

from :: BAM_V1_6 -> Rep BAM_V1_6 x

to :: Rep BAM_V1_6 x -> BAM_V1_6

Show BAM_V1_6

Defined in Data.BAM.Version1_6.Base

Methods

showsPrec :: Int -> BAM_V1_6 -> ShowS

show :: BAM_V1_6 -> String

showList :: [BAM_V1_6] -> ShowS

Eq BAM_V1_6

Defined in Data.BAM.Version1_6.Base

Methods

(==) :: BAM_V1_6 -> BAM_V1_6 -> Bool

(/=) :: BAM_V1_6 -> BAM_V1_6 -> Bool

type Rep BAM_V1_6

Defined in Data.BAM.Version1_6.Base

type Rep BAM_V1_6 = D1 ('MetaData "BAM_V1_6" "Data.BAM.Version1_6.Base" "hs-samtools-0.10.0.3-inplace" 'True) (C1 ('MetaCons "BAM_V1_6" 'PrefixI 'True) (S1 ('MetaSel ('Just "bam_v1_6") 'NoSourceUnpackedness 'NoSourceStrictness 'DecidedLazy) (Rec0 (Seq BAM_V1_6_BGZFBlock))))