hs-samtools-0.10.0.3: Read and write SAM, BAM, and CRAM files.

Index - P

parse_BAM_V1_6_BAMData.BAM.Version1_6.Read.Parser.BAM.Base
parse_BAM_V1_6_BAM_AlignmentData.BAM.Version1_6.Read.Parser.BAM.Alignment.Base
parse_BAM_V1_6_BAM_Alignment_OptionalFields_AOPTData.BAM.Version1_6.Read.Parser.BAM.Alignment.OptionalFields.AOPT
parse_BAM_V1_6_BAM_Alignment_OptionalFields_BigCOPTData.BAM.Version1_6.Read.Parser.BAM.Alignment.OptionalFields.BigCOPT
parse_BAM_V1_6_BAM_Alignment_OptionalFields_BigIOPTData.BAM.Version1_6.Read.Parser.BAM.Alignment.OptionalFields.BigIOPT
parse_BAM_V1_6_BAM_Alignment_OptionalFields_BigSOPTData.BAM.Version1_6.Read.Parser.BAM.Alignment.OptionalFields.BigSOPT
parse_BAM_V1_6_BAM_Alignment_OptionalFields_BOPTData.BAM.Version1_6.Read.Parser.BAM.Alignment.OptionalFields.BOPT
parse_BAM_V1_6_BAM_Alignment_OptionalFields_FOPTData.BAM.Version1_6.Read.Parser.BAM.Alignment.OptionalFields.FOPT
parse_BAM_V1_6_BAM_Alignment_OptionalFields_HOPTData.BAM.Version1_6.Read.Parser.BAM.Alignment.OptionalFields.HOPT
parse_BAM_V1_6_BAM_Alignment_OptionalFields_SmallCOPTData.BAM.Version1_6.Read.Parser.BAM.Alignment.OptionalFields.SmallCOPT
parse_BAM_V1_6_BAM_Alignment_OptionalFields_SmallIOPTData.BAM.Version1_6.Read.Parser.BAM.Alignment.OptionalFields.SmallIOPT
parse_BAM_V1_6_BAM_Alignment_OptionalFields_SmallSOPTData.BAM.Version1_6.Read.Parser.BAM.Alignment.OptionalFields.SmallSOPT
parse_BAM_V1_6_BAM_Alignment_OptionalFields_ZOPTData.BAM.Version1_6.Read.Parser.BAM.Alignment.OptionalFields.ZOPT
parse_BAM_V1_6_BAM_BAMAlignmentsData.BAM.Version1_6.Read.Parser.BAM.BAMAlignments
parse_BAM_V1_6_BAM_BAMHeaderData.BAM.Version1_6.Read.Parser.BAM.BAMHeader
parse_BAM_V1_6_BAM_Reference_InformationData.BAM.Version1_6.Read.Parser.BAM.ReferenceInformation.Base
parse_BAM_V1_6_BGZFBlockData.BAM.Version1_6.Read.Parser.BGZFBlock
parse_SAM_V1_6_AlignmentData.SAM.Version1_6.Read.Parser.Alignment.Base
parse_SAM_V1_6_Alignment_OptionalFields_AOPTData.SAM.Version1_6.Read.Parser.Alignment.OptionalFields.AOPT
parse_SAM_V1_6_Alignment_OptionalFields_BOPTData.SAM.Version1_6.Read.Parser.Alignment.OptionalFields.BOPT
parse_SAM_V1_6_Alignment_OptionalFields_FOPTData.SAM.Version1_6.Read.Parser.Alignment.OptionalFields.FOPT
parse_SAM_V1_6_Alignment_OptionalFields_HOPTData.SAM.Version1_6.Read.Parser.Alignment.OptionalFields.HOPT
parse_SAM_V1_6_Alignment_OptionalFields_IOPTData.SAM.Version1_6.Read.Parser.Alignment.OptionalFields.IOPT
parse_SAM_V1_6_Alignment_OptionalFields_ZOPTData.SAM.Version1_6.Read.Parser.Alignment.OptionalFields.ZOPT
parse_SAM_V1_6_File_Level_MetadataData.SAM.Version1_6.Read.Parser.Header.HD.Base
parse_SAM_V1_6_File_Level_Metadata_GOData.SAM.Version1_6.Read.Parser.Header.HD.GO
parse_SAM_V1_6_File_Level_Metadata_SOData.SAM.Version1_6.Read.Parser.Header.HD.SO
parse_SAM_V1_6_File_Level_Metadata_SSData.SAM.Version1_6.Read.Parser.Header.HD.SS
parse_SAM_V1_6_File_Level_Metadata_VNData.SAM.Version1_6.Read.Parser.Header.HD.VN
parse_SAM_V1_6_One_Line_CommentData.SAM.Version1_6.Read.Parser.Header.CO.Base
parse_SAM_V1_6_ProgramData.SAM.Version1_6.Read.Parser.Header.PG.Base
parse_SAM_V1_6_Program_CLData.SAM.Version1_6.Read.Parser.Header.PG.CL
parse_SAM_V1_6_Program_DSData.SAM.Version1_6.Read.Parser.Header.PG.DS
parse_SAM_V1_6_Program_IDData.SAM.Version1_6.Read.Parser.Header.PG.ID
parse_SAM_V1_6_Program_PNData.SAM.Version1_6.Read.Parser.Header.PG.PN
parse_SAM_V1_6_Program_PPData.SAM.Version1_6.Read.Parser.Header.PG.PP
parse_SAM_V1_6_Program_VNData.SAM.Version1_6.Read.Parser.Header.PG.VN
parse_SAM_V1_6_Read_GroupData.SAM.Version1_6.Read.Parser.Header.RG.Base
parse_SAM_V1_6_Read_Group_BCData.SAM.Version1_6.Read.Parser.Header.RG.BC
parse_SAM_V1_6_Read_Group_CNData.SAM.Version1_6.Read.Parser.Header.RG.CN
parse_SAM_V1_6_Read_Group_DSData.SAM.Version1_6.Read.Parser.Header.RG.DS
parse_SAM_V1_6_Read_Group_DTData.SAM.Version1_6.Read.Parser.Header.RG.DT
parse_SAM_V1_6_Read_Group_FOData.SAM.Version1_6.Read.Parser.Header.RG.FO
parse_SAM_V1_6_Read_Group_IDData.SAM.Version1_6.Read.Parser.Header.RG.ID
parse_SAM_V1_6_Read_Group_KSData.SAM.Version1_6.Read.Parser.Header.RG.KS
parse_SAM_V1_6_Read_Group_LBData.SAM.Version1_6.Read.Parser.Header.RG.LB
parse_SAM_V1_6_Read_Group_PGData.SAM.Version1_6.Read.Parser.Header.RG.PG
parse_SAM_V1_6_Read_Group_PIData.SAM.Version1_6.Read.Parser.Header.RG.PI
parse_SAM_V1_6_Read_Group_PLData.SAM.Version1_6.Read.Parser.Header.RG.PL
parse_SAM_V1_6_Read_Group_PMData.SAM.Version1_6.Read.Parser.Header.RG.PM
parse_SAM_V1_6_Read_Group_PUData.SAM.Version1_6.Read.Parser.Header.RG.PU
parse_SAM_V1_6_Read_Group_SMData.SAM.Version1_6.Read.Parser.Header.RG.SM
parse_SAM_V1_6_Reference_Sequence_DictionaryData.SAM.Version1_6.Read.Parser.Header.SQ.Base
parse_SAM_V1_6_Reference_Sequence_Dictionary_AHData.SAM.Version1_6.Read.Parser.Header.SQ.AH
parse_SAM_V1_6_Reference_Sequence_Dictionary_ANData.SAM.Version1_6.Read.Parser.Header.SQ.AN
parse_SAM_V1_6_Reference_Sequence_Dictionary_ASData.SAM.Version1_6.Read.Parser.Header.SQ.AS
parse_SAM_V1_6_Reference_Sequence_Dictionary_DSData.SAM.Version1_6.Read.Parser.Header.SQ.DS
parse_SAM_V1_6_Reference_Sequence_Dictionary_LNData.SAM.Version1_6.Read.Parser.Header.SQ.LN
parse_SAM_V1_6_Reference_Sequence_Dictionary_M5Data.SAM.Version1_6.Read.Parser.Header.SQ.M5
parse_SAM_V1_6_Reference_Sequence_Dictionary_SNData.SAM.Version1_6.Read.Parser.Header.SQ.SN
parse_SAM_V1_6_Reference_Sequence_Dictionary_SPData.SAM.Version1_6.Read.Parser.Header.SQ.SP
parse_SAM_V1_6_Reference_Sequence_Dictionary_TPData.SAM.Version1_6.Read.Parser.Header.SQ.TP
parse_SAM_V1_6_Reference_Sequence_Dictionary_URData.SAM.Version1_6.Read.Parser.Header.SQ.UR