SLynx.Translate.Options

Creation date: Sun Oct 7 17:29:45 2018.

Documentation

data TranslateArguments

Arguments needed to translate sequences.

Constructors

TranslateArguments

Fields

• trAlphabet :: Alphabet
• trInFile :: FilePath
• trReadingFrame :: Int
• trUniversalCode :: UniversalCode

Instances

FromJSON TranslateArguments

Defined in SLynx.Translate.Options

Methods

parseJSON :: Value -> Parser TranslateArguments

parseJSONList :: Value -> Parser [TranslateArguments]

ToJSON TranslateArguments

Defined in SLynx.Translate.Options

Methods

toJSON :: TranslateArguments -> Value

toEncoding :: TranslateArguments -> Encoding

toJSONList :: [TranslateArguments] -> Value

toEncodingList :: [TranslateArguments] -> Encoding

Generic TranslateArguments

Defined in SLynx.Translate.Options

Associated Types

type Rep TranslateArguments :: Type -> Type

Methods

from :: TranslateArguments -> Rep TranslateArguments x

to :: Rep TranslateArguments x -> TranslateArguments

Show TranslateArguments

Defined in SLynx.Translate.Options

Methods

showsPrec :: Int -> TranslateArguments -> ShowS

show :: TranslateArguments -> String

showList :: [TranslateArguments] -> ShowS

Reproducible TranslateArguments

Defined in SLynx.Translate.Options

Methods

inFiles :: TranslateArguments -> [FilePath]

outSuffixes :: TranslateArguments -> [String]

getSeed :: TranslateArguments -> Maybe SeedOpt

setSeed :: TranslateArguments -> SeedOpt -> TranslateArguments

parser :: Parser TranslateArguments

cmdName :: String

cmdDsc :: [String]

cmdFtr :: [String]

Eq TranslateArguments

Defined in SLynx.Translate.Options

Methods

(==) :: TranslateArguments -> TranslateArguments -> Bool

(/=) :: TranslateArguments -> TranslateArguments -> Bool

type Rep TranslateArguments

Defined in SLynx.Translate.Options

type Rep TranslateArguments = D1 ('MetaData "TranslateArguments" "SLynx.Translate.Options" "slynx-0.7.2.0-CUsuQI7hzpbG4fBPmsolcR" 'False) (C1 ('MetaCons "TranslateArguments" 'PrefixI 'True) ((S1 ('MetaSel ('Just "trAlphabet") 'NoSourceUnpackedness 'NoSourceStrictness 'DecidedLazy) (Rec0 Alphabet) :*: S1 ('MetaSel ('Just "trInFile") 'NoSourceUnpackedness 'NoSourceStrictness 'DecidedLazy) (Rec0 FilePath)) :*: (S1 ('MetaSel ('Just "trReadingFrame") 'NoSourceUnpackedness 'NoSourceStrictness 'DecidedLazy) (Rec0 Int) :*: S1 ('MetaSel ('Just "trUniversalCode") 'NoSourceUnpackedness 'NoSourceStrictness 'DecidedLazy) (Rec0 UniversalCode))))

translateArguments :: Parser TranslateArguments

Command line parser.