Compare.Options

Creation date: Thu Aug 29 13:02:22 2019.

Documentation

data CompareArguments

Arguments needed to compute distance measures.

Constructors

CompareArguments

Fields

• argsDistance :: Distance
• argsSummaryStatistics :: Bool
• argsInFiles :: [FilePath]

type Compare = LoggingT (ReaderT CompareArguments IO)

Lgger and reader data type.

data Distance

Supported distance measures.

Constructors

Symmetric

Symmetric distance.

IncompatibleSplit Double

Incompatible split distance; collapse nodes with branch support below given value.

BranchScore Bool

Branch score distance. If given, normalize the trees before comparison.

Instances

Show Distance

Defined in Compare.Options

Methods

showsPrec :: Int -> Distance -> ShowS

show :: Distance -> String

showList :: [Distance] -> ShowS

compareArguments :: Parser CompareArguments

COmmand line parser.

compareFooter :: String

Information about provided distance types.