TLynx.Examine.Options

Creation date: Thu Aug 29 08:16:45 2019.

Documentation

data ExamineArguments

Arguments needed to examine phylogenetic trees.

Constructors

ExamineArguments

Fields

• argsInFile :: FilePath
• argsNewickFormat :: NewickFormat

Instances

FromJSON ExamineArguments

Defined in TLynx.Examine.Options

Methods

parseJSON :: Value -> Parser ExamineArguments

parseJSONList :: Value -> Parser [ExamineArguments]

omittedField :: Maybe ExamineArguments

ToJSON ExamineArguments

Defined in TLynx.Examine.Options

Methods

toJSON :: ExamineArguments -> Value

toEncoding :: ExamineArguments -> Encoding

toJSONList :: [ExamineArguments] -> Value

toEncodingList :: [ExamineArguments] -> Encoding

omitField :: ExamineArguments -> Bool

Generic ExamineArguments

Defined in TLynx.Examine.Options

Associated Types

type Rep ExamineArguments :: Type -> Type

Methods

from :: ExamineArguments -> Rep ExamineArguments x

to :: Rep ExamineArguments x -> ExamineArguments

Show ExamineArguments

Defined in TLynx.Examine.Options

Methods

showsPrec :: Int -> ExamineArguments -> ShowS

show :: ExamineArguments -> String

showList :: [ExamineArguments] -> ShowS

Reproducible ExamineArguments

Defined in TLynx.Examine.Options

Methods

inFiles :: ExamineArguments -> [FilePath]

outSuffixes :: ExamineArguments -> [String]

getSeed :: ExamineArguments -> Maybe SeedOpt

setSeed :: ExamineArguments -> SeedOpt -> ExamineArguments

parser :: Parser ExamineArguments

cmdName :: String

cmdDsc :: [String]

cmdFtr :: [String]

Eq ExamineArguments

Defined in TLynx.Examine.Options

Methods

(==) :: ExamineArguments -> ExamineArguments -> Bool

(/=) :: ExamineArguments -> ExamineArguments -> Bool

type Rep ExamineArguments

Defined in TLynx.Examine.Options

type Rep ExamineArguments = D1 ('MetaData "ExamineArguments" "TLynx.Examine.Options" "tlynx-0.8.0.0-5Y3L4oZkBrMJMkRRBBsAW2" 'False) (C1 ('MetaCons "ExamineArguments" 'PrefixI 'True) (S1 ('MetaSel ('Just "argsInFile") 'NoSourceUnpackedness 'NoSourceStrictness 'DecidedLazy) (Rec0 FilePath) :*: S1 ('MetaSel ('Just "argsNewickFormat") 'NoSourceUnpackedness 'NoSourceStrictness 'DecidedLazy) (Rec0 NewickFormat)))

examineArguments :: Parser ExamineArguments

Command line parser.