The CMCompare package

[Tags: gpl, library, program]

Compares two Infernal covariance models. Returns the common MaxiMin score and the offending RNA sequence. High scores point toward low discriminative power of the two models. Based on: Discriminatory Power or RNA Family Models, Hoener zu Siederdissen and Hofacker, 2010, accepted for eccb10


Properties

Versions0.0.1.1, 0.0.1.2, 0.0.1.4, 0.0.1.5
Dependenciesarray, base (==4.*), Biobase (>=0.1.0 && <0.2.0), cmdargs (==0.6.4), HsTools (>=0.0.1.1 && <0.0.2)
LicenseGPL-3
CopyrightChristian Hoener zu Siederdissen, Ivo L. Hofacker, 2010
AuthorChristian Hoener zu Siederdissen, Ivo L. Hofacker
Maintainerchoener@tbi.univie.ac.at
Stabilityexperimental
CategoryBioinformatics
Home pagehttp://www.tbi.univie.ac.at/software/cmcompare/
ExecutableshsCMCompare
Upload dateTue May 31 15:47:33 UTC 2011
Uploaded byChristianHoener
Downloads447 total (51 in last 30 days)

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