HsHTSLib: Bindings to htslib.

[ bio, library, mit ] [ Propose Tags ]

This package provides bindings to htslib, a library for processing high throughput DNA sequencing data.


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Versions [faq] 1.3.2.0, 1.3.2.1, 1.3.2.2, 1.3.2.3, 1.3.2.4, 1.9.0, 1.9.0.1, 1.9.1, 1.9.2
Change log ChangeLog.md
Dependencies base (>=4.10 && <5.0), bytestring, bytestring-lexing, conduit (>=1.3.0), containers [details]
License MIT
Copyright (c) 2016-2019 Kai Zhang
Author Kai Zhang
Maintainer kai@kzhang.org
Category Bio
Source repo head: git clone https://github.com/kaizhang/HsHTSLib.git
Uploaded by kaizhang at Fri Mar 22 21:26:25 UTC 2019
Distributions NixOS:1.9.2
Downloads 2131 total (278 in the last 30 days)
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Status Hackage Matrix CI
Docs not available [build log]
Last success reported on 2019-03-22 [all 3 reports]

Modules

  • Bio
    • Bio.HTS
      • Bio.HTS.BAM
      • Bio.HTS.Internal
      • Bio.HTS.Types
      • Bio.HTS.Utils

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Readme for HsHTSLib-1.9.2

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htslib configuration

bz2, lzma, libcurl are disabled as CRAM is not supported by this library.