modify-fasta-0.8.0.3: Modify fasta (and CLIP) files in several optional ways

Safe Haskell	Safe
Language	Haskell98

Types

Documentation

data GeneticUnit Source

Constructors

AminoAcid
Nucleotide

Instances

Read GeneticUnit Source
Show GeneticUnit Source

data FrameType Source

Constructors

InFrame
OutFrame

Instances

Read FrameType Source
Show FrameType Source

type ID = Int Source

type Codon = Text Source

type CodonMut = Int Source

type Field = Int Source

type Start = Int Source

type Stop = Int Source

type Position = Int Source

type Frame = Int Source

type CloneEntry = (Germline, [FastaSequence]) Source

type FillInValue = (Field, Start, Char) Source

type Mutation = (Char, Char) Source

type CountMap = Map (Position, Mutation) Int Source

type CodonMutations = [[(Position, Mutation)]] Source