xsact-1.6: Cluster EST sequences
Source code
Contents
Index
WordMap
Documentation
type
WordMap
=
Map
Key
[
Suffix
]
Source
type
Key
=
Integer
Source
genkeys
::
Int
->
Int
->
EST
-> [(
Int
,
Key
)]
Source
genkeysN
::
Int
->
Int
->
EST
-> [(
Int
,
Key
)]
Source
list2keys
::
Int
-> [
Gene
] -> [
Key
]
Source
mkWordMap
::
Int
-> [
EST
] ->
WordMap
Source
get_k
::
WordMap
->
Int
Source
wmlookup
::
WordMap
->
Key
-> [
Suffix
]
Source
n2i
:: [
Gene
] ->
Key
Source
i2n
::
Key
-> [
Gene
]
Source
i2s
::
Key
->
String
Source
shift_left
::
Int
->
Key
->
Gene
->
Key
Source
shift_right
::
Int
->
Key
->
Gene
->
Key
Source
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