Biobase.Secondary.Vienna

Encoding of Watson-Crick and Wobble Pairs in the Vienna RNA package style.

Documentation

newtype ViennaPair

Use machine Ints internally

Constructors

ViennaPair Int

Instances

Bounded ViennaPair

Enum ViennaPair

Eq ViennaPair

Ord ViennaPair

Read ViennaPair

Show ViennaPair

Ix ViennaPair

Prim ViennaPair

Unbox ViennaPair

Bounds ViennaPair

Vector Vector ViennaPair

MVector MVector ViennaPair

class MkViennaPair a where

Methods

mkViennaPair :: a -> ViennaPair

fromViennaPair :: ViennaPair -> a

Instances

MkViennaPair (Nuc, Nuc)

revPair :: ViennaPair -> ViennaPair

reverse a vienna pair

Convenience structures