Contents
Index
MutationOrder-0.0.0.1: Most likely order of mutation events in RNA
Index
aCount
BioInf.MutationOrder.MinDist
aInside
1 (Function)
BioInf.MutationOrder.MinDist
2 (Function)
BioInf.MutationOrder.EdgeProb
aMinDist
BioInf.MutationOrder.MinDist
aMinDistCount
BioInf.MutationOrder.MinDist
aPretty
BioInf.MutationOrder.MinDist
backtrackMinDist1
BioInf.MutationOrder.MinDist
basepairDistanceCentroid
BioInf.MutationOrder
basepairDistanceMFE
BioInf.MutationOrder
bldD1S
BioInf.MutationOrder.RNA
BoundaryPart
1 (Type/Class)
BioInf.MutationOrder.MinDist
2 (Data Constructor)
BioInf.MutationOrder.MinDist
boundaryPart
BioInf.MutationOrder.MinDist
boundaryPartFunFirst
BioInf.MutationOrder.MinDist
boundaryPartFunLast
BioInf.MutationOrder.MinDist
bpNormalized
BioInf.MutationOrder.MinDist
bpTotal
BioInf.MutationOrder.MinDist
bpUnnormalized
BioInf.MutationOrder.MinDist
BT1
BioInf.MutationOrder.MinDist
BT1L
BioInf.MutationOrder.MinDist
BTU
BioInf.MutationOrder.MinDist
centroidD1S
BioInf.MutationOrder.RNA
centroidDelta
BioInf.MutationOrder
centroidEnergy
BioInf.MutationOrder.RNA
centroidStructure
BioInf.MutationOrder.RNA
countBackMinDist1
BioInf.MutationOrder.MinDist
createRNAlandscape
BioInf.MutationOrder.RNA
EB
BioInf.MutationOrder.EdgeProb
edgeProbPartFun
BioInf.MutationOrder.EdgeProb
edgeProbScoreMatrix
BioInf.MutationOrder.EdgeProb
FillStyle
BioInf.MutationOrder
FillWeight
BioInf.MutationOrder
forwardMinDist1
BioInf.MutationOrder.MinDist
fromFile
BioInf.MutationOrder.RNA
fromFileJSON
BioInf.MutationOrder.RNA
FSfull
BioInf.MutationOrder
FSopacityLinear
BioInf.MutationOrder
FSopacityLog
BioInf.MutationOrder
FWfill
BioInf.MutationOrder
FWlinear
BioInf.MutationOrder
FWlog
BioInf.MutationOrder
insertMutations
BioInf.MutationOrder.RNA
Landscape
1 (Type/Class)
BioInf.MutationOrder.RNA
2 (Data Constructor)
BioInf.MutationOrder.RNA
landscapeDestination
BioInf.MutationOrder.RNA
landscapeOrigin
BioInf.MutationOrder.RNA
mfeD1S
BioInf.MutationOrder.RNA
mfeDelta
BioInf.MutationOrder
mfeEnergy
BioInf.MutationOrder.RNA
mfeStructure
BioInf.MutationOrder.RNA
minDistCount
BioInf.MutationOrder.MinDist
mkRNA
BioInf.MutationOrder.RNA
mutationCount
BioInf.MutationOrder.RNA
mutationPositions
BioInf.MutationOrder.RNA
mutationSet
BioInf.MutationOrder.RNA
PF
BioInf.MutationOrder.MinDist
PFL
BioInf.MutationOrder.MinDist
posScaled
BioInf.MutationOrder
primarySequence
BioInf.MutationOrder.RNA
qlcentroid
BioInf.MutationOrder.RNA
qlensemble
BioInf.MutationOrder.RNA
QLine
1 (Type/Class)
BioInf.MutationOrder.RNA
2 (Data Constructor)
BioInf.MutationOrder.RNA
qlines
BioInf.MutationOrder.RNA
qlmfe
BioInf.MutationOrder.RNA
qlSequence
BioInf.MutationOrder.RNA
RNA
1 (Type/Class)
BioInf.MutationOrder.RNA
2 (Data Constructor)
BioInf.MutationOrder.RNA
rnas
BioInf.MutationOrder.RNA
runCoOptDist
BioInf.MutationOrder.MinDist
runCount
BioInf.MutationOrder.MinDist
runMutationOrder
BioInf.MutationOrder
scaleByFunction
BioInf.MutationOrder
ScaleFunction
BioInf.MutationOrder.MinDist
,
BioInf.MutationOrder
scaleTemperature
BioInf.MutationOrder
squaredPositive
BioInf.MutationOrder
stupidReader
BioInf.MutationOrder
TF1
BioInf.MutationOrder.EdgeProb
TL1
BioInf.MutationOrder.EdgeProb
toFile
BioInf.MutationOrder.RNA
toFileJSON
BioInf.MutationOrder.RNA
TS1
BioInf.MutationOrder.MinDist
TS1L
BioInf.MutationOrder.MinDist
U
BioInf.MutationOrder.MinDist
withDumpFile
BioInf.MutationOrder