estreps: Repeats from ESTs
rselect - select a random set of sequences from a FASTA file, optinally with random orientation (forward/reverse complement).
reps - extract exact k-word repeats based that occur in sequences grouped in different clusters.
The Darcs repository is at: http://malde.org/~ketil/biohaskell/estreps.
[Skip to Readme]
Downloads
- estreps-0.3.tar.gz [browse] (Cabal source package)
- Package description (as included in the package)
Maintainer's Corner
For package maintainers and hackage trustees
Candidates
- No Candidates
Versions [RSS] | 0.1, 0.3, 0.3.1 |
---|---|
Dependencies | base (>3), bio (>=0.3.3), bytestring, containers, random [details] |
License | LicenseRef-GPL |
Author | Ketil Malde |
Maintainer | Ketil Malde <ketil@malde.org> |
Category | Bioinformatics |
Home page | http://blog.malde.org/ |
Uploaded | by KetilMalde at 2009-01-30T19:55:39Z |
Distributions | |
Reverse Dependencies | 1 direct, 0 indirect [details] |
Executables | reps, rselect |
Downloads | 2754 total (10 in the last 30 days) |
Rating | (no votes yet) [estimated by Bayesian average] |
Your Rating | |
Status | Docs not available [build log] All reported builds failed as of 2017-01-02 [all 7 reports] |