Data.BAM.Version1_6.BAM.BAMAlignments

Description

This library enables the decoding/encoding of SAM, BAM and CRAM file formats.

BAM_V1_6_BAM_BAMAlignment version 1.6 data type

newtype BAM_V1_6_BAM_BAMAlignments

Custom BAM_V1_6_BAM_BAMAlignments (BAM version 1.6) data type.

See the SAM v1.6 specification documentation.

Constructors

BAM_V1_6_BAM_BAMAlignments

Fields

• bam_v1_6_bam_bamalignments_alignments :: Seq BAM_V1_6_BAM_Alignment

  List of alignments.

Instances

Generic BAM_V1_6_BAM_BAMAlignments

Defined in Data.BAM.Version1_6.BAM.BAMAlignments

Associated Types

type Rep BAM_V1_6_BAM_BAMAlignments :: Type -> Type

Methods

from :: BAM_V1_6_BAM_BAMAlignments -> Rep BAM_V1_6_BAM_BAMAlignments x

to :: Rep BAM_V1_6_BAM_BAMAlignments x -> BAM_V1_6_BAM_BAMAlignments

Show BAM_V1_6_BAM_BAMAlignments

Defined in Data.BAM.Version1_6.BAM.BAMAlignments

Methods

showsPrec :: Int -> BAM_V1_6_BAM_BAMAlignments -> ShowS

show :: BAM_V1_6_BAM_BAMAlignments -> String

showList :: [BAM_V1_6_BAM_BAMAlignments] -> ShowS

Eq BAM_V1_6_BAM_BAMAlignments

Defined in Data.BAM.Version1_6.BAM.BAMAlignments

Methods

(==) :: BAM_V1_6_BAM_BAMAlignments -> BAM_V1_6_BAM_BAMAlignments -> Bool

(/=) :: BAM_V1_6_BAM_BAMAlignments -> BAM_V1_6_BAM_BAMAlignments -> Bool

type Rep BAM_V1_6_BAM_BAMAlignments

Defined in Data.BAM.Version1_6.BAM.BAMAlignments

type Rep BAM_V1_6_BAM_BAMAlignments = D1 ('MetaData "BAM_V1_6_BAM_BAMAlignments" "Data.BAM.Version1_6.BAM.BAMAlignments" "hs-samtools-0.10.0.3-inplace" 'True) (C1 ('MetaCons "BAM_V1_6_BAM_BAMAlignments" 'PrefixI 'True) (S1 ('MetaSel ('Just "bam_v1_6_bam_bamalignments_alignments") 'NoSourceUnpackedness 'NoSourceStrictness 'DecidedLazy) (Rec0 (Seq BAM_V1_6_BAM_Alignment))))