sgrep: Sgrep - grep Fasta files for sequences matching a regular expression
This is a simple utility to extract sequences from Fasta files. It expects its first parameter to be a regular expression, and its second to be a Fasta-formatted file. It will then output all sequences matching the regexp to standard output.
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- sgrep-0.0.tar.gz [browse] (Cabal source package)
- Package description (as included in the package)
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| Versions [RSS] | 0.0 |
|---|---|
| Dependencies | base (>=3 && <5), bio, regex-compat [details] |
| License | LicenseRef-GPL |
| Author | Ketil Malde |
| Maintainer | Ketil Malde <ketil@malde.org> |
| Category | Bioinformatics |
| Home page | http://blog.malde.org/ |
| Uploaded | by KetilMalde at 2010-09-13T13:37:05Z |
| Distributions | |
| Reverse Dependencies | 1 direct, 0 indirect [details] |
| Executables | sgrep |
| Downloads | 1116 total (2 in the last 30 days) |
| Rating | (no votes yet) [estimated by Bayesian average] |
| Your Rating | |
| Status | Docs not available [build log] Successful builds reported [all 7 reports] |