sgrep: Sgrep - grep Fasta files for sequences matching a regular expression

[ bioinformatics, program ] [ Propose Tags ]

This is a simple utility to extract sequences from Fasta files. It expects its first parameter to be a regular expression, and its second to be a Fasta-formatted file. It will then output all sequences matching the regexp to standard output.

Versions 0.0
Dependencies base (>=3 && <5), bio, regex-compat [details]
License LicenseRef-GPL
Author Ketil Malde
Maintainer Ketil Malde <ketil@malde.org>
Category Bioinformatics
Home page http://blog.malde.org/
Uploaded by KetilMalde at Mon Sep 13 13:37:05 UTC 2010
Distributions NixOS:0.0
Executables sgrep
Downloads 554 total (8 in the last 30 days)
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Status Docs not available [build log]
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