BlastHTTP: Libary to interface with the NCBI blast REST interface

[ bioinformatics, gpl, library ] [ Propose Tags ]

Searches for a provided nucleotide or protein sequence with the NCBI Blast REST service and returns a blast result in xml format as BlastResult datatype.

For more information on BLAST refer to: http://blast.ncbi.nlm.nih.gov/Blast.cgi.

Information on the webservice can be found at: http://www.ncbi.nlm.nih.gov/BLAST/developer.shtml.

If you plan to submit more than 20 searches in one session, please look up the Usage Guidelines in the webservice information.

Versions [faq] 0.0.1, 1.0.0, 1.0.1, 1.2.0, 1.2.1, 1.3.0
Dependencies base (>=4.5 && <5), biocore, blastxml, bytestring, conduit, HTTP, http-conduit, hxt, mtl, network, transformers [details]
License GPL-3.0-only
Author Florian Eggenhofer
Maintainer egg@tbi.univie.ac.at
Category Bioinformatics
Home page https://github.com/eggzilla/BlastHTTP
Source repo head: git clone https://github.com/eggzilla/BlastHTTP
this: darcs get https://github.com/eggzilla/BlastHTTP/tree/v1.0.0 --tag v1.0.0
Uploaded by FlorianEggenhofer at Thu Mar 6 13:06:51 UTC 2014
Distributions NixOS:1.3.0
Downloads 3379 total (168 in the last 30 days)
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Status Hackage Matrix CI
Docs not available [build log]
All reported builds failed as of 2016-12-18 [all 6 reports]

Modules

  • Bio
    • Bio.BlastHTTP

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