biosff: Library and executables for working with SFF files

[ bioinformatics, lgpl, library ] [ Propose Tags ]

The library contains the functionality for reading and writing SFF files (sequencing data from 454 and Ion Torrent). It duplicates code from (and is incompatible with) the "bio" library.

Versions [faq] 0.1, 0.2, 0.3.1, 0.3.2, 0.3.3, 0.3.4, 0.3.5, 0.3.7, 0.3.7.1
Dependencies array (>=0.4), base (>=3 && <5), binary, biocore (>=0.3), bytestring, cmdargs, mtl (>=2) [details]
License LGPL-2.1-only
Author Ketil Malde
Maintainer ketil@malde.org
Category Bioinformatics
Home page http://biohaskell.org/
Source repo head: darcs get http://malde.org/~ketil/biohaskell/biosff
this: darcs get http://malde.org/~ketil/biohaskell/biosff --tag 0.3.7
Uploaded by KetilMalde at Sat Sep 28 14:16:14 UTC 2013
Distributions NixOS:0.3.7.1
Executables fclip, frecover, flower
Downloads 5659 total (153 in the last 30 days)
Rating (no votes yet) [estimated by rule of succession]
Your Rating
  • λ
  • λ
  • λ
Status Hackage Matrix CI
Docs available [build log]
Successful builds reported [all 1 reports]

Modules

[Index]

Flags

NameDescriptionDefaultType
flower

Build the flower executable.

EnabledAutomatic
frecover

Build the frecover executable.

EnabledAutomatic
fclip

Build the fclip executable.

EnabledAutomatic

Use -f <flag> to enable a flag, or -f -<flag> to disable that flag. More info

Downloads

Maintainer's Corner

For package maintainers and hackage trustees