The biostockholm package

[Tags:bsd3, library, test]

Parsing and rendering of files in Stockholm 1.0 format. Among the users of the Stockholm format are Pfam, Rfam and Infernal. These files hold information about families of proteins or non-coding RNAs. For more information, please see:

Properties

Versions 0.1, 0.1.0.1, 0.2, 0.2.1, 0.2.2, 0.3, 0.3.1, 0.3.2, 0.3.3, 0.3.4
Dependencies attoparsec (==0.10.*), attoparsec-conduit (==0.4.*), base (>=3 && <5), biocore (>=0.1 && <0.3), blaze-builder (==0.3.*), blaze-builder-conduit (==0.4.*), bytestring (==0.9.*), conduit (==0.4.*), containers (>=0.2 && <0.6), deepseq (>=1.1 && <1.4) [details]
License BSD3
Author Felipe Lessa
Maintainer felipe.lessa@gmail.com
Stability Unknown
Category Bioinformatics
Source repository head: git clone https://github.com/meteficha/biostockholm
Uploaded Tue Jul 21 22:25:00 UTC 2015 by FelipeLessa
Distributions NixOS:0.3.4
Downloads 1949 total (46 in the last 30 days)
Votes
0 []
Status Docs not available [build log]
All reported builds failed as of 2016-10-27 [all 9 reports]

Modules

  • Bio
    • Sequence
      • Bio.Sequence.Stockholm
        • Bio.Sequence.Stockholm.Document
        • Bio.Sequence.Stockholm.Stream

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