The diskhash package

[Tags:library, mit, test]

Disk-based hash table


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Properties

Versions 0.0.1.0, 0.0.1.1, 0.0.1.2
Change log ChangeLog
Dependencies base (>4.8 && <5), bytestring (==0.10.*) [details]
License MIT
Author Luis Pedro Coelho
Maintainer Luis Pedro Coelho
Category Data
Bug tracker https://github.com/luispedro/diskhash/issues
Source repository head: git clone https://github.com/luispedro/diskhash
Uploaded Mon Jun 26 20:27:12 UTC 2017 by luispedro
Updated Mon Jun 26 21:43:39 UTC 2017 by luispedro to revision 1
Distributions NixOS:0.0.1.2
Downloads 100 total (100 in the last 30 days)
Votes
0 []
Status Docs available [build log]
Last success reported on 2017-06-26 [all 1 reports]
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Readme for diskhash

Readme for diskhash-0.0.1.2

Disk-based hashtable

Travis License: MIT

A simple disk-based hash table.

The code is in C, wrappers are provided for Python, Haskell, and C++. The wrappers follow similar APIs with variations to accomodate the language specificity. They all use the same underlying code, so you can open a hashtable created in C from Haskell, modify it within your Haskell code, and open the result in Python (although Python's version currently only deals with integers, stored as longs).

Cross-language functionality will work best for very simple types so that you can control their binary representation (64-bit integers, for example).

Reading does not touch the disk representation at all and, thus, can be done on top of read-only files or using multiple threads. Writing or modifying values is, however, not thread-safe.

Examples

The following examples all create a hashtable to store longs (int64_t), then set the value associated with the key "key" to 9. In the current API, the maximum size of the keys needs to be pre-specified, which is the value 15 below.

Raw C

#include <stdio.h>
#include <inttypes.h>
#include "diskhash.h"

int main(void) {
    HashTableOpts opts;
    opts.key_maxlen = 15;
    opts.object_datalen = sizeof(int64_t);
    char* err = NULL;
    HashTable* ht = dht_open("testing.dht", opts, O_RDWR|O_CREAT, &err);
    if (!ht) {
        if (!err) err = "Unknown error";
        fprintf(stderr, "Failed opening hash table: %s.\n", err);
        return 1;
    }
    long i = 9;
    dht_insert(ht, "key", &i);
    
    long* val = (long*) dht_lookup(ht, "key");
    printf("Looked up value: %l\n", *val);

    dht_free(ht);
    return 0;
}

Haskell

In Haskell, you have different types/functions for read-write and read-only hashtables.

Read write example:

import Data.DiskHash
import Data.Int
main = do
    ht <- htOpenRW "testing.dht" 15
    htInsertRW ht "key" (9 :: Int64)
    val <- htLookupRW "key" ht
    print val

Read only example (htLookupRO is pure in this case):

import Data.DiskHash
import Data.Int
main = do
    ht <- htOpenRO "testing.dht" 15
    let val :: Int64
        val = htLookupRO "key" ht
    print val

Python

Python's interface is more limited and only integers are supported as values in the hash table (they are stored as 64-bit integers).

import diskhash
tb = diskhash.Str2int("testing.dht", 15)
tb.insert("key", 9)
print(tb.lookup("key"))

The Python interface is currently Python 3 only. Patches to extend it to 2.7 are welcome, but it's not a priority.

C++

In C++, a simple wrapper is defined, which provides a modicum of type-safety. You use the DiskHash<T> template. Additionally, errors are reported through exceptions (both std::bad_alloc and std::runtime_error can be thrown) and not return codes.

#include <iostream>
#include <string>

#include <diskhash.hpp>

int main() {
    const int key_maxlen = 15;
    dht::DiskHash<uint64_t> ht("testing.dht", key_maxlen, dht::DHOpenRW);
    std::string line;
    uint64_t ix = 0;
    while (std::getline(std::cine, line)) {
        if (line.length() > key_maxlen) {
            std::cerr << "Key too long: '" << line << "'. Aborting.\n";
            return 2;
        }
        const bool inserted = ht.insert(line.c_str(), ix);
        if (!inserted) {
            std::cerr  << "Found repeated key '" << line << "' (ignored).\n";
        }
        ++ix;
    }
    return 0;
}

Statibility

This is beta software. It is good enough that I am using it, but the API can change in the future with little warning. The binary format is versioned (the magic string encodes its version, so changes can be detected).

Automated unit testing ensures that basic mistakes will not go uncaught.

Limitations

  • You must specify the maximum key size. This can be worked around either by pre-hashing the keys (with a strong hash) or using multiple hash tables for different key sizes. Neither is currently implemented in diskhash.

  • You cannot delete objects. This was not a necessity for my uses, so it was not implemented. A simple implementation could be done by marking objects as "deleted" in place and recompacting when the hash table size changes or with an explicit dht_gc() call. It may also be important to add functionality to shrink hashtables so as to not waste disk space.

License: MIT