The seqloc-datafiles package

[ Tags: bioinformatics, library, mit, program ] [ Propose Tags ]

Read and write BED and GTF format genome annotations

Properties

Versions 0.1, 0.1.1, 0.2, 0.2.1, 0.2.1.1, 0.2.2, 0.2.2.1, 0.2.2.2, 0.4, 0.4.2
Dependencies attoparsec (>=0.8.5), base (>=4.2 && <5), biocore, bytestring, hashable, haskell98, iteratee (>=0.8.1), monads-tf, QuickCheck, random, seqloc (>=0.3.1), transformers, unordered-containers [details]
License MIT
Author Nick Ingolia
Maintainer nick@ingolia.org
Category Bioinformatics
Uploaded Sat Oct 1 12:08:02 UTC 2011 by NicholasIngolia
Distributions NixOS:0.4.2
Executables gtf-introns, test-bed, test-gtf, gtf-to-bed
Downloads 2089 total (141 in the last 30 days)
Rating (no votes yet) [estimated by rule of succession]
Your Rating
  • λ
  • λ
  • λ
Status Docs not available [build log]
All reported builds failed as of 2016-12-27 [all 7 reports]
Hackage Matrix CI

Modules

  • Bio
    • SeqLoc
      • Bio.SeqLoc.Bed
      • Bio.SeqLoc.GTF
      • Bio.SeqLoc.TranscriptTable

Flags

NameDescriptionDefaultType
tests

Build test program

DisabledAutomatic

Use -f <flag> to enable a flag, or -f -<flag> to disable that flag. More info

Downloads

Maintainer's Corner

For package maintainers and hackage trustees