The seqloc-datafiles package

[ Tags: bioinformatics, library, mit, program ] [ Propose Tags ]

Read and write BED and GTF format genome annotations

Properties

Versions 0.1, 0.1.1, 0.2, 0.2.1, 0.2.1.1, 0.2.2, 0.2.2.1, 0.2.2.2, 0.4, 0.4.2
Dependencies attoparsec (>=0.8.5), base (>=4.2 && <5), biocore (>=0.2), bytestring, cmdtheline, conduit, conduit-extra, filepath, hashable, iteratee (>=0.8.1), lifted-base (>=0.2.3), monads-tf, pretty, QuickCheck, random, resourcet, seqloc (>=0.6), transformers, transformers-base (>=0.4.3), unordered-containers, vector [details]
License MIT
Author Nick Ingolia
Maintainer nick@ingolia.org
Category Bioinformatics
Home page http://www.ingolia-lab.org/seqloc-datafiles-tutorial.html
Source repository head: git clone http://github.com/ingolia/seqloc(seqloc-datafiles)
Uploaded Fri Mar 20 20:32:37 UTC 2015 by NicholasIngolia
Distributions NixOS:0.4.2
Executables genome-to-trx, bed-subregion, gtf-introns, bed-to-gtf, gtf-to-bed
Downloads 1936 total (11 in the last 30 days)
Rating 0.0 (0 ratings) [clear rating]
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Status Docs available [build log]
Last success reported on 2015-03-20 [all 1 reports]
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