hierarchical-spectral-clustering: Hierarchical spectral clustering of a graph.

[ bioinformatics, gpl, library, program ] [ Propose Tags ]

Generate a tree of hierarchical spectral clustering using Newman-Girvan modularity as a stopping criteria.

Versions [faq] 0.2.1.0, 0.2.1.1, 0.2.2.0, 0.2.2.1, 0.3.0.0, 0.3.0.1, 0.4.0.0, 0.4.0.1, 0.4.0.2, 0.4.1.0, 0.4.1.1, 0.4.1.2, 0.4.1.3
Dependencies aeson, aeson-pretty, base (>=4.7 && <5), bytestring, cassava, clustering, containers, eigen (==3.3.4.1), fgl, filepath, hierarchical-clustering, hierarchical-spectral-clustering, hmatrix, lens, managed, modularity, mtl, optparse-generic, safe, sparse-linear-algebra, spectral-clustering, streaming, streaming-bytestring, streaming-cassava, streaming-with, text, text-show, tree-fun, vector [details]
License GPL-3.0-only
Copyright 2018 Gregory W. Schwartz
Author Gregory W. Schwartz
Maintainer gsch@pennmedicine.upenn.edu
Category Bioinformatics
Home page http://github.com/GregorySchwartz/hierarchical-spectral-clustering#readme
Source repo head: git clone https://github.com/GregorySchwartz/hierarchical-spectral-clustering
Uploaded by GregorySchwartz at Thu Jan 10 16:57:55 UTC 2019
Distributions NixOS:0.4.1.3
Executables cluster-tree
Downloads 1061 total (156 in the last 30 days)
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Status Hackage Matrix CI
Docs not available [build log]
All reported builds failed as of 2019-01-10 [all 3 reports]

Modules

  • Math
    • Clustering
      • Hierarchical
        • Spectral
          • Math.Clustering.Hierarchical.Spectral.Dense
          • Eigen
            • Math.Clustering.Hierarchical.Spectral.Eigen.AdjacencyMatrix
            • Math.Clustering.Hierarchical.Spectral.Eigen.FeatureMatrix
          • Math.Clustering.Hierarchical.Spectral.Load
          • Math.Clustering.Hierarchical.Spectral.Sparse
          • Math.Clustering.Hierarchical.Spectral.Types
          • Math.Clustering.Hierarchical.Spectral.Utility
    • Graph
      • Math.Graph.Components
      • Math.Graph.Types

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