The samtools package

[Tags: library, mit]

Binding to the C samtools library, which reads and writes SAM format alignments, both binary and tab- delimited text formats. It also supports rapid access to specific alignments in a sorted BAM file and access to sequences from indexed Fasta files.

Properties

Versions0.1, 0.1.1, 0.1.2, 0.1.3, 0.2, 0.2.0.1, 0.2.1, 0.2.1.1, 0.2.1.2, 0.2.2, 0.2.3, 0.2.4, 0.2.4.1
Change logNone available
Dependenciesbase (>=4.3 && <5), bytestring, filepath, haskell98, process, seqloc, vector (>=0.7) [details]
LicenseMIT
AuthorNicholas Ingolia
Maintainernick@ingolia.org
CategoryBio
Home pagehttp://www.ingolia-lab.org/software/samtools/
Executablessamtest
UploadedFri Apr 1 16:47:45 UTC 2011 by NicholasIngolia
DistributionsNixOS:0.2.4.1
Downloads2074 total (103 in last 30 days)
Votes
0 []
StatusDocs not available [build log]
All reported builds failed as of 2015-06-07 [all 2 reports]

Modules

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testsBuild test programDisabledAutomatic

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