The ViennaRNA-extras package

[ Tags: bioinformatics, bsd3, library ] [ Propose Tags ]

Extra functionality on top of the ViennaRNA bindings. Please note the special license of the ViennaRNA bindings (while the -extras library is BSD3, it is not very useful without the bindings)!

If you use this software, please cite:

R. Lorenz, S.H. Bernhart, C. Hoener zu Siederdissen, H. Tafer, C. Flamm, P.F. Stadler and I.L. Hofacker (2011)
ViennaRNA Package 2.0
Algorithms for Molecular Biology: 6:26

http://www.almob.org/content/6/1/26


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Properties

Versions 0.0.0.1
Change log changelog.md
Dependencies array, attoparsec (>=0.13), base (>=4.7 && <5.0), BiobaseTypes (==0.1.3.*), BiobaseXNA (==0.10.0.*), bytestring, deepseq (>=1.4), lens (>=4.0), QuickCheck (>=2.0), streaming (>=0.1), streaming-bytestring (>=0.1), strict (>=0.3), strict-base-types (>=0.5), ViennaRNA-bindings (==0.233.2.*) [details]
License BSD3
Copyright Christian Hoener zu Siederdissen, 2017
Author Christian Hoener zu Siederdissen, 2017
Maintainer choener@bioinf.uni-leipzig.de
Category Bioinformatics
Home page https://github.com/choener/ViennaRNA-extras
Bug tracker https://github.com/choener/ViennaRNA-extras/issues
Source repository head: git clone git://github.com/choener/ViennaRNA-extras
Uploaded Thu Nov 23 22:28:17 UTC 2017 by ChristianHoener
Distributions NixOS:0.0.0.1
Downloads 61 total (61 in the last 30 days)
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Status Docs available [build log]
Last success reported on 2017-11-23 [all 1 reports]
Hackage Matrix CI

Modules

[Index]

Flags

NameDescriptionDefaultType
debug

Enable bounds checking and various other debug operations

DisabledManual

Use -f <flag> to enable a flag, or -f -<flag> to disable that flag. More info

Downloads

Maintainer's Corner

For package maintainers and hackage trustees


Readme for ViennaRNA-extras-0.0.0.1

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Build Status

ViennaRNA extras

A number of high-level functions that extend the functionality provided by ViennaRNA-bindings.

Contact

Christian Hoener zu Siederdissen
Leipzig University, Leipzig, Germany
choener@bioinf.uni-leipzig.de
http://www.bioinf.uni-leipzig.de/~choener/