BlastHTTP: Libary to interface with the NCBI blast REST interface
Searches for a provided nucleotide or protein sequence with the NCBI Blast REST service and returns a blast result in xml format as BlastResult datatype.
For more information on BLAST refer to: http://blast.ncbi.nlm.nih.gov/Blast.cgi.
Information on the webservice can be found at: http://www.ncbi.nlm.nih.gov/BLAST/developer.shtml.
If you plan to submit more than 20 searches in one session, please look up the Usage Guidelines in the webservice information.
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- BlastHTTP-1.3.0.tar.gz [browse] (Cabal source package)
- Package description (as included in the package)
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For package maintainers and hackage trustees
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Versions [RSS] | 0.0.1, 1.0.0, 1.0.1, 1.2.0, 1.2.1, 1.3.0, 1.4.0, 1.4.1, 1.4.2 |
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Change log | changelog |
Dependencies | base (>=4.5 && <5), BiobaseBlast (>=0.2.1.0), biocore, biofasta, blastxml, bytestring, conduit, either-unwrap, HTTP, http-conduit, hxt, mtl, network, transformers [details] |
License | GPL-3.0-only |
Copyright | Florian Eggenhofer |
Author | Florian Eggenhofer |
Maintainer | florian.eggenhofer@univie.ac.at |
Category | Bioinformatics |
Home page | https://github.com/eggzilla/BlastHTTP |
Source repo | head: git clone https://github.com/eggzilla/BlastHTTP this: git clone https://github.com/eggzilla/BlastHTTP/tree/1.3.0(tag 1.3.0) |
Uploaded | by FlorianEggenhofer at 2018-03-12T16:44:21Z |
Distributions | |
Reverse Dependencies | 2 direct, 0 indirect [details] |
Downloads | 7653 total (25 in the last 30 days) |
Rating | (no votes yet) [estimated by Bayesian average] |
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Status | Docs available [build log] Last success reported on 2018-03-12 [all 1 reports] |