biosff: Library and executables for working with SFF files
The library contains the functionality for reading and writing SFF files (sequencing data from 454 and Ion Torrent). It duplicates code from (and is incompatible with) the "bio" library.
| Versions | 0.1, 0.2, 0.3.1, 0.3.2, 0.3.3, 0.3.4, 0.3.5, 0.3.7, 0.3.7.1 |
|---|---|
| Dependencies | array (>=0.4), base (>=3 && <5), binary, biocore (>=0.3), bytestring, cmdargs, mtl (>=2) [details] |
| License | LGPL-2.1-only |
| Author | Ketil Malde |
| Maintainer | ketil@malde.org |
| Category | Bioinformatics |
| Home page | http://biohaskell.org/ |
| Source repo | head: darcs get http://malde.org/~ketil/biohaskell/biosff this: darcs get http://malde.org/~ketil/biohaskell/biosff --tag 0.3.7 |
| Uploaded | by KetilMalde at Sat Sep 28 14:16:14 UTC 2013 |
| Distributions | NixOS:0.3.7.1 |
| Executables | fclip, frecover, flower |
| Downloads | 4174 total (93 in the last 30 days) |
| Rating | (no votes yet) [estimated by rule of succession] |
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| Status | Docs available [build log] Successful builds reported [all 1 reports] Hackage Matrix CI |
Flags
| Name | Description | Default | Type |
|---|---|---|---|
| flower | Build the | Enabled | Automatic |
| frecover | Build the | Enabled | Automatic |
| fclip | Build the | Enabled | Automatic |
Use -f <flag> to enable a flag, or -f -<flag> to disable that flag. More info
Downloads
- biosff-0.3.7.1.tar.gz [browse] (Cabal source package)
- Package description (as included in the package)