The biosff package
The library contains the functionality for reading and writing SFF files (sequencing data from 454 and Ion Torrent). It duplicates code from (and is incompatible with) the bio library.
Properties
| Versions | 0.1, 0.2, 0.3.1, 0.3.2, 0.3.3, 0.3.4, 0.3.5, 0.3.7, 0.3.7.1 |
|---|---|
| Dependencies | array (>=0.4), base (>=3 && <5), binary, biocore (>=0.3), bytestring, cmdargs, mtl (>=2) [details] |
| License | LGPL-2.1 |
| Author | Ketil Malde |
| Maintainer | ketil@malde.org |
| Stability | Experimental |
| Category | Bioinformatics |
| Home page | http://biohaskell.org/ |
| Source repository | head: darcs get http://malde.org/~ketil/biohaskell/biosff this: darcs get http://malde.org/~ketil/biohaskell/biosff --tag 0.3.7 |
| Uploaded | Sat Sep 28 14:16:14 UTC 2013 by KetilMalde |
| Distributions | NixOS:0.3.7.1 |
| Downloads | 2401 total (20 in the last 30 days) |
| Votes | |
| Status | Docs available [build log] Successful builds reported [all 1 reports] |
Flags
| Name | Description | Default | Type |
|---|---|---|---|
| flower | Build the 'flower' executable. | Enabled | Automatic |
| frecover | Build the 'frecover' executable. | Enabled | Automatic |
| fclip | Build the 'fclip' executable. | Enabled | Automatic |
Use -f <flag> to enable a flag, or -f -<flag> to disable that flag. More info
Downloads
- biosff-0.3.7.1.tar.gz [browse] (Cabal source package)
- Package description (included in the package)