hTalos: Parser, print and manipulate structures in PDB file format.
Protein Data Bank file format is a most popular format for holding biomolecule data. This is a very fast parser (below 7s for the largest entry in PDB - 1HTQ which is over 70MB - as compared with 11s of RASMOL 2.7.5, or 2m15s of BioPython with Python 2.6 interpreter.) It is aimed to not only deliver event-based interface, but also a high-level data structure for manipulating data in spirit of BioPython's PDB parser.
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- hTalos-0.2.tar.gz [browse] (Cabal source package)
- Package description (as included in the package)
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| Versions [RSS] | 0.2 |
|---|---|
| Dependencies | base (>=4.0 && <4.7), bytestring [details] |
| Tested with | ghc ==7.4.2 |
| License | BSD-3-Clause |
| Copyright | Copyright by MPIBPC, Michal J. Gajda '2013 |
| Author | Michal J. Gajda |
| Maintainer | mjgajda@googlemail.com |
| Category | Bioinformatics |
| Home page | https://github.com/mgajda/hTalos |
| Bug tracker | mailto:mjgajda@googlemail.com |
| Source repo | head: git clone git://github.com:mgajda/hpdb.git |
| Uploaded | by MichalGajda at 2013-11-23T15:03:03Z |
| Distributions | |
| Reverse Dependencies | 1 direct, 0 indirect [details] |
| Downloads | 1169 total (6 in the last 30 days) |
| Rating | (no votes yet) [estimated by Bayesian average] |
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| Status | Docs available [build log] Successful builds reported [all 2 reports] |
