seqloc-datafiles: Read and write BED and GTF format genome annotations

[ bioinformatics, library, mit, program ] [ Propose Tags ]

Read and write BED and GTF format genome annotations

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Versions [RSS] 0.1, 0.1.1, 0.2, 0.2.1, 0.2.1.1, 0.2.2, 0.2.2.1, 0.2.2.2, 0.4, 0.4.2
Dependencies attoparsec (>=0.8.5), base (>=4.2 && <5), biocore (>=0.2), bytestring, hashable, iteratee (>=0.8.1), monads-tf, QuickCheck, random, seqloc (>=0.3.1), transformers, unordered-containers [details]
License MIT
Author Nick Ingolia
Maintainer nick@ingolia.org
Category Bioinformatics
Home page http://www.ingolia-lab.org/seqloc-datafiles-tutorial.html
Source repo head: git clone http://github.com/ingolia/seqloc(seqloc-datafiles)
Uploaded by NicholasIngolia at 2012-09-04T20:28:12Z
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Reverse Dependencies 1 direct, 0 indirect [details]
Executables gtf-introns, test-bed, test-gtf, bed-to-gtf, gtf-to-bed
Downloads 6951 total (33 in the last 30 days)
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