BiobaseEnsembl: Ensembl related datastructures and functions

[ bioinformatics, gpl, library ] [ Propose Tags ]

This library contains high through put sequencing and Ensembl-related functionality: - Datastructures to query Ensembl REST interface

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Dependencies aeson (>=1.0), attoparsec (>=0.13), base (>=4.7 && <5.0), binary (>=0.7), bytestring, cereal (>=0.4), containers, deepseq (>=1.3), directory, either-unwrap, text, vector (>=0.10), word8 [details]
License GPL-3.0-only
Copyright Florian Eggenhofer, 2018
Author Florian Eggenhofer
Category Bioinformatics
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Source repo head: git clone
this: git clone
Uploaded by FlorianEggenhofer at Wed Dec 12 10:43:52 UTC 2018
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Downloads 282 total (22 in the last 30 days)
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Status Hackage Matrix CI
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Last success reported on 2018-12-12 [all 3 reports]


  • Biobase
    • Ensembl
      • REST
        • Biobase.Ensembl.REST.Types
    • Biobase.GFF3
      • Biobase.GFF3.Export
      • Biobase.GFF3.Import
      • Biobase.GFF3.Types


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Readme for BiobaseEnsembl-

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BiobaseEnsembl Build Status

This library contains Ensembl related functions and datastructures:

  • GFF3
  • EnsemblGenomes Query Datastructures