The BiobaseFR3D package

[Tags:gpl, library]

Provides importers for FR3D resource files. Of particular interest are basepairs files which describe canonical and non-canonical (non-Watson-Crick) base pairings in RNA secondary structure.

The original FR3D paper is:

FR3D: Finding Local and Composite Recurrent Structural Motifs in RNA 3D Structures, Michael Sarver; Craig L. Zirbel; Jesse Stombaugh; Ali Mokdad; Neocles B. Leontis. /Journal of Mathematical Biology/ (2008) 56:215–252.

Changes since any 0.1.*:


Dependencies base (>3 && <5), BiobaseXNA (==, bytestring, containers, filemanip, iteratee, tuple [details]
License GPL-3
Copyright Christian Hoener zu Siederdissen, 2011
Author Christian Hoener zu Siederdissen
Category Bioinformatics
Home page
Uploaded Thu Feb 16 14:20:59 UTC 2012 by ChristianHoener
Distributions NixOS:
Downloads 1678 total (13 in the last 30 days)
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Status Docs uploaded by user
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