biohazard: bioinformatics support library
This is a collection of modules I separated from various bioinformatics tools. The hope is to make them reusable and easier to maintain. Also includes some of these tools and a bunch that work on mitochondrial sequences.
Modules
[Index]
Flags
Manual Flags
| Name | Description | Default |
|---|---|---|
| debug | enable additional sanity checks | Disabled |
Use -f <flag> to enable a flag, or -f -<flag> to disable that flag. More info
Downloads
- biohazard-0.6.13.tar.gz [browse] (Cabal source package)
- Package description (as included in the package)
| Versions [RSS] | 0.6.1, 0.6.2, 0.6.3, 0.6.5, 0.6.6, 0.6.6.1, 0.6.9, 0.6.10, 0.6.13, 0.6.15, 0.6.16, 1.0.0, 1.0.1, 1.0.2, 1.0.3, 1.0.4, 1.1.0, 1.1.1, 2.0, 2.1 (info) |
|---|---|
| Dependencies | aeson (>=0.7 && <1.1), async (>=2.0 && <2.2), attoparsec (>=0.10 && <0.14), base (>=4.6 && <4.10), base-prelude (>=1.0 && <1.1), binary (>=0.7 && <0.9), bytestring (>=0.10.2 && <0.11), bytestring-mmap (>=0.2 && <1.0), containers (>=0.4.1 && <0.6), directory (>=1.2 && <2.0), exceptions (>=0.6 && <0.9), filepath (>=1.3 && <2.0), hashable (>=1.0 && <1.3), ListLike (>=3.0 && <5.0), monad-control (>=1.0 && <1.1), primitive (>=0.5 && <0.7), random (>=1.0 && <1.2), scientific (>=0.3 && <0.4), stm (>=2.4 && <2.5), text (>=1.0 && <2.0), transformers (>=0.4.1 && <0.6), transformers-base (>=0.4 && <0.6), unix (>=2.5 && <2.8), unordered-containers (>=0.2.3 && <0.3), vector (>=0.11 && <0.12), vector-algorithms (>=0.3 && <1.0), vector-th-unbox (>=0.2 && <0.3), zlib (>=0.6 && <0.7) [details] |
| Tested with | ghc ==7.8.4, ghc ==7.10.1, ghc ==8.0.1 |
| License | BSD-3-Clause |
| Copyright | (C) 2010-2017 Udo Stenzel |
| Author | Udo Stenzel |
| Maintainer | udo.stenzel@eva.mpg.de |
| Category | Bioinformatics |
| Home page | http://github.com/udo-stenzel/biohazard |
| Source repo | head: git clone https://bitbucket.org/ustenzel/biohazard.git |
| Uploaded | by ustenzel at 2017-03-07T12:11:16Z |
| Distributions | |
| Reverse Dependencies | 1 direct, 0 indirect [details] |
| Downloads | 12500 total (25 in the last 30 days) |
| Rating | (no votes yet) [estimated by Bayesian average] |
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| Status | Docs uploaded by user Build status unknown [no reports yet] |