BiobaseInfernal: Infernal data structures and tools

[ benchmark, bioinformatics, gpl, library, program ] [ Propose Tags ]
Dependencies attoparsec, attoparsec‑iteratee, base (>3 && <5), bytestring, containers, either‑unwrap, iteratee, transformers, tuple [details]
License GPL-3.0-only
Copyright Christian Hoener zu Siederdissen, 2011
Author Christian Hoener zu Siederdissen
Category Bioinformatics
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Uploaded by ChristianHoener at Wed Aug 3 14:33:01 UTC 2011
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Downloads 7421 total (64 in the last 30 days)
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Provides import and export facilities for Infernal/Rfam data formats. We include Stockholm, CM, verbose Infernal results, and tabulated Infernal results. Some small tools are included.

With the BioHaskell library split, this package is officially back! And the package is not feature-complete yet, take the above as a will-include-soon list.

The taxonomy importer makes use of, hence the switch from Enumerator. (See the Biohaskell wiki pages for discussion on Iteratee/Enumerator).




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