The samtools package

[Tags: library, mit]

Binding to the C samtools library, which reads and writes SAM format alignments, both binary and tab- delimited text formats. It also supports rapid access to specific alignments in a sorted BAM file and access to sequences from indexed Fasta files.


Properties

Versions0.1, 0.1.1, 0.1.2, 0.1.3, 0.2, 0.2.0.1, 0.2.1, 0.2.1.1, 0.2.1.2, 0.2.2, 0.2.3
Dependenciesbase (>=4.2 && <5), bytestring, filepath, process, seqloc (>=0.3.1), vector (>=0.7)
LicenseMIT
AuthorNicholas Ingolia
Maintainernick@ingolia.org
CategoryBioinformatics
Home pagehttp://www.ingolia-lab.org/samtools-tutorial.html
Source repositoryhead: git clone http://github.com/ingolia/samtools(samtools)
Executablessamtest
Upload dateSun Jun 17 03:07:52 UTC 2012
Uploaded byNicholasIngolia
Downloads779 total (61 in last 30 days)

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