The RNAFoldProgs package

[Tags:gpl, program]

RNA secondary structure following Fast Folding and Comparison of RNA Secondary Structures, Hofacker et al., 1994. Uses the Turner 2004 parameter set. The algorithm work on an algebraic ring structure that is instanciated as required. This prelimenary release contains the minimum-free energy version only.

Properties

Versions 0.0.0.1, 0.0.0.2, 0.0.0.3
Dependencies base (==4.*), Biobase (==0.0.2.*), BiobaseTurner (>=0.0.2.1 && <0.0.3), BiobaseTypes (>=0.0.2.1 && <0.0.3), BiobaseVienna (==0.0.2.*), cmdargs (==0.6), containers, HsTools (>=0.0.1.1), primitive (==0.3.*), PrimitiveArray (==0.0.2.*), RNAFold (==0.0.2.*), split (>=0.0.2.1), vector (==0.7.*) [details]
License GPL-3
Copyright Christian Hoener zu Siederdissen (Haskell), Ivo L. Hofacker et al. (ViennaRNA package)
Author Christian Hoener zu Siederdissen (Haskell), Ivo L. Hofacker et al. (ViennaRNA package)
Maintainer choener@tbi.univie.ac.at
Stability experimental
Category Bioinformatics
Uploaded Thu Sep 23 11:53:04 UTC 2010 by ChristianHoener
Distributions NixOS:0.0.0.3
Downloads 776 total (12 in the last 30 days)
Votes
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Status Docs not available [build log]
All reported builds failed as of 2015-12-08 [all 7 reports]

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